PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.H0LHH
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 411aa    MW: 44462.5 Da    PI: 9.5523
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.H0LHHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-05178200223
                  EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                   C+ Cg++F+  ++L+ H+ + H
  Aradu.H0LHH 178 ACSECGEVFPKMESLELHQAVrH 200
                  6******************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280177200IPR007087Zinc finger, C2H2
PROSITE profilePS501579.058177201IPR007087Zinc finger, C2H2
SuperFamilySSF563993.55E-24202407No hitNo description
Gene3DG3DSA:3.90.228.102.5E-13206407IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MALLALLPEH SLPNNNNGKN KINNKQKQKH KQNQKQKQKE KQGSSSSSSW EQIKNLISCK  60
QVEGSRVHDP SSSKSMMGSS CSSICSFRDV VHGNTRVVHR ADNSSPESSS LGQQETGLLS  120
RKPAAKSSRR SSGKSNGGAT YTPSSSKGMQ FRKLSGCYEC HMIIDPSRLP IPRSSVCACS  180
ECGEVFPKME SLELHQAVRH AVWELGPEDS GRNIVEIIFK SSWLKKDNSI CKIERILKVQ  240
NSQRTIQRFE ECRDSVKSRA QNSSKKNPRC AADGNELLRF HCTTLTCPLG AQGSTALCTA  300
IPGCGVCTVI RHGFQGGGKG VKTTASSGRA HDSLAGHCGA PRAMLVCRVI AGRVRRVPED  360
APPEDDGVSA SGGYDSIAGS AGIYSNLEEL VVFNPRAILP CFVVVYKVLS C
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969843.10.0PREDICTED: uncharacterized protein LOC107493257
TrEMBLA0A151U6M00.0A0A151U6M0_CAJCA; Uncharacterized protein
STRINGGLYMA17G37710.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-143C2H2-like zinc finger protein